Papers - SASAKI Takuji
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Tamyb10-D1 restores red grain color and increases grain dormancy via suppressing expression of TaLTP2.128, Non-specific Lipid Transfer Protein in wheat Reviewed International journal
Eiko Himi, Shiho Kurihara-Yonemoto, Fumitaka Abe, Hidekazu Takahashi, Keisuke Tanaka, Takakazu Matsuura, Masahiko Maekawa, Takuji Sasaki, Kazuhide Rikiishi
Euphytica 220 2024.01
Language：English Publishing type：Research paper (scientific journal) Publisher：Springer/Nature
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Evolutionary Dynamics and Impacts of Chromosomal Regions Carrying R-Gene Clusters in Rice. Reviewed
Hiroshi Mizuno, Satoshi Katagiri, Hiroyuki Kanamori, Yoshiyuki Mukai, Takuji Sasaki, Takashi Matsumoto & Jianzhong Wu
Scientific Reports 10 872 2020.01
Authorship：Lead author Language：English Publishing type：Research paper (scientific journal)
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EAT1 Transcription Factor, A Non-Cell-Autonomous Regulator of Pollen Production, Activates Meiotic small RNA Biogenesis in Rice Anther Tapetum Reviewed
Seijiro Ono, Hua Liu, Katsutoshi Tsuda, Eigo Fukai, Keisuke Tanaka, Takuji Sasaki, Ken-Ichi Nonomura
PLoS Genetics 12 ( 2 ) e1007238 2018.02
Language：English Publishing type：Research paper (scientific journal)
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Detection of novel QTLs qDTH4.5 and qDTH6.3, which confer late heading under short-day conditions, by SSR marker-based and QTL-seq analysis Reviewed
Eri Ogiso-Tanaka, Tsuyoshi Tanaka, Keisuke Tanaka,Yasunori Nonoue, Takuji Sasaki, Erina Fushimi, Yohei Koide,Yutaka Okumoto, Masahiro Yano, Hiroki Saito ,
Breeding Science 2017.03
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1270/jsbbs.16096
Other Link： https://www.jstage.jst.go.jp/browse/jsbbs/
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A Chromosome Segment Substitution Library of Weedy Rice for Genetic Dissection of Complex Agronomic and Domestication Traits Reviewed
Prasanta K.Subudhi, Teresa De Leon, Pradeep K. Singh, Arnold Parco, Marc A. Cohn, Takuji Sasaki
PLoS ONE 10 ( 6 ) e0130650 2015.06
Authorship：Lead author Language：English Publishing type：Research paper (scientific journal)
DOI： doi:10.1371/journal.pone.0130650
Other Link： http://www.plosone.org
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The radish genome and comprehensive gene expression profile of tuberous root formation and development Reviewed
Yuki Mitsui, Michihiko Shimomura, Kenji Komatsu, Nobukazu Namiki, Mari Shibata-Hatta, Misaki Imai, Yuichi Katayose, Yoshiyuki Mukai, Hiroyuki Kanamori, Kanako Kurita, Tsutomu Kagami, Akihto Wakatsuki, Hajime Ohyanagi, Hirshi Ikawa, Nobuhiro Minaka, Kunihiro Nakagawa, Yu Shiwa & Takuji Sasaki
Scientific Reports 5 ( 10835 ) 1 - 14 2015.06
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1038/srep10835
Other Link： http://www.nature.com/srep/index.html
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Mapping of Seed Shattering Loci Provides Insights into Origin of Weedy Rice and Rice Domestication Reviewed
Prasanta K.Subudhi, Praddeep K.Singh, Teresa DeLeon, Arnold Parco, Ratna Karan, Hanamareddy Biradar, Marc A.Cohn, Takuji Sasaki
Journal of Heredity 2013.12
Language：English Publishing type：Research paper (scientific journal)
Other Link： http://jhered.oxfordjournals.org/
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A BAC physical map of aus rice cultivar ‘Kasalath’ and the map-based genomic sequence of ‘Kasalath’ chromosome 1 Reviewed
Hiroyuki Kanamori, Masaki Fujisawa, Satoshi Katagiri, Youko Oono, Hiroko Fujisawa, Wataru Karasawa, Kanako Kurita, Harumi Sasaki, Satomi Mori, Masao Hamada, Yoshiyuki Mukai, Takayuki Yazawa, Hiroshi Mizuno, Nobukazu Namiki, Takuji Sasaki, Yuichi Katayose, Takashi Matsumoto and Jianzhong Wu
Plant Journal 76 ( 4 ) 699 - 708 2013.08
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1111/tpj.12317
Other Link： http://onlinelibrary.wiley.com/journal/10.1111/%28ISSN%291365-313X
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Rice Annotation Project Database (RAP-DB): An integrative and interactive database for rice genomics Reviewed
Hiroaki Sakai, Sung Shin Lee, Tsuyoshi Tanaka, Hisataka Numa, Jungsok Kim, Yoshihiro Kawahara, Hironobu Wakimoto, Ching-chia Yang, Masao Iwamoto, Takashi Abe, Yuko Yamada, Akira Muto, Hachiro Inokuchi, Toshimichi Ikemura, Takashi Matsumoto, Takuji Sasaki, and Takeshi Itoh
Plant and Cell Physiology 2013.01
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1093/pcp/pcs183
Other Link： http://pcp.oxfordjournals.org/
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DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa) Reviewed
Hiromi Higo, Muhammad Tahir, 3, Kazuya Takashima, Asuka Miura, Koichi Watanabe, Akemi Tagiri, Masashi Ugaki, Ryuji Ishikawa, Mitsugu Eiguchi, Nori Kurata, Takuji Sasaki, Eric Richards, Makoto Takano, Naoki Kishimoto, Tetsuji Kakutani and Yoshiki Habu
Molecular Genetics and Genomics 2012.08
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1007/s00438-012-0717-5
Other Link： http://www.springerlink.com/content/1617-4615/
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Genetic Architecture of Seed Dormancy in US Weedy Rice in Different Genetic Background Reviewed
Prasanta K.Subudhi, Arnold Parco, Pradeep K.Singh, Teresa DeLeon, Ratna Karan, Hanamareddy Biradar, Marc A.Cohn, Darshan S.Brar & Takuji Sasaki
Crop Science 2012.06
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.2135/cropsci2012.04.0228
Other Link： https://www.crops.org/publications/cs
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DaizuBase, an integrated soybean genome database including BAC-based physical map Reviewed
Yuichi Katayose, Hiroyuki kanamori, Michihiko Shimomura, Hajime Ohyanagi, Hiroshi Ikawa, Hiroshi Minami, Michie Shibata, Tomoko Ito, Kanako Kurita, Kazue Ito, Yasutaka Tsubokura, Akito Kaga, Jianzhong Wu, Takashi Matsumoto, Kyuya Harada, and Takuji Sasaki
Breeding Science 61 ( 5 ) 661 - 664 2012.02
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1270/jsbbs.61.661
Other Link： http://www.jstage.jst.go.jp/article/jsbbs/61/5/61_661/_article
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Asymmetric Distribution of Gene Expression in the Centromeric Region of Rice Chromosome 5 Reviewed
Hiroshi Mizuno, Yoshihiro Kawahara, Jianzhong Wu, Yuichi Katayose, Hiroyuki Kanamori, Hiroshi Ikawa, Takeshi Itoh, Takuji Sasaki, Takashi Matsumoto
Frontiers in Plant Science 2011.06
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
イネ第５染色体動原体のゲノム塩基配列を決定した。組換えが抑制されている動原体隣接領域は2.14Mbあり、この中の長腕側、短腕側にそれぞれ２８個および４５個の遺伝子の存在を予測した。この領域の転写産物のレベルと量をシーケンス解析で求めたところ、長腕側に比べて短腕側の方が有意に低いことが示された。
Other Link： http://www.frontiersin.org/plant_science
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Distinct Evolutionary Patterns of Oryza glaberrima Deciphered by Genome Sequencing and Comparative Analysis Reviewed
Hiroaki Sakai, Hiroshi Ikawa, Tsuyoshi Tanaka, Hisataka Numa, Hiroshi Minami, Masaki Fujisawa, Michie Shibata, Kanako Kurita, Ari Kikuta, Masao Hamada, Hiroyuki Kanamori, Nobukazu Namiki, Jianzhong Wu, Takeshi Itoh, Takashi Matsumoto, Takuji Sasaki
The Plant Journal 66 ( 5 ) 796 - 805 2011.06
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
アフリカ栽培米Oryza glaberrimaのゲノム塩基配列を決定し、アジア栽培米Oryza sativaのゲノム塩基配列と比較した。両者間に2451個のSSRを同定した。
DOI： 10.1111/j.1365-313X.2011.04539.x
Other Link： http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1365-313X
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The Role of Casein Kinase II in Flowering Time Regulation Has Diversified during Evolution Reviewed
Eri Ogiso, Yuji Takahashi, Takuji Sasaki, Masahiro Yano, Takeshi Izawa
Plant Physiology 152 ( 2 ) 808 - 820 2010.02
Language：English Publishing type：Research paper (scientific journal)
イネ感光性遺伝子Hd6の機能解明を目的にHd6とHd1の相互作用を短日あるいは長日条件下で詳細に調べたところHd6の機能発現には機能しているHd1が必要であり、またHd6は開花期を制御するイネ体内時計の一部ではないことを示した。
Other Link： http://www.plantphysiol.org/
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Comparative Analysis of Complete Orthologous Centromeres from Two Subspecies of Rice Reveals rapid Variation of Centromere Organization and Structure Reviewed
Wu,J., Fujisawa,M., Tian,Z., Yamagata,H., Kamiya,K., Shibata,M., Namiki.N., Mizuno,H., Ma, J .,Sasaki,T., Matsumoto,T.
The Plant Journal 60 ( 5 ) 805 - 819 2009.12
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
インディカ種イネ、カサラスの第8染色体の動原体構造を決定した。ジャポニカ種イネ、日本晴のそれと比べて動原体特有の繰り返し配列単位の存在様式が大きく異なり、イネ栽培種間においてさえも動原体の急速な進化が裏付けられた。
DOI： 10.1111/j.1365-313X.2009.04002.x
Other Link： http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1365-313X
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Molecularand Evolutionary Analysis of the Hd6 Photoperiod Sensitivity Gene within Oryza. Reviewed
Yamane,H., Ito,T., Ishikubo,H., Fujisawa,M.,Yamagata, H., Kamiya,K., Ito,Y. Hamada,M., Kanamori,H., Ikawa,H., Katayose,Y., Wu,J., Sasaki,T. & Matsumoto,T.
Rice 2 ( 1 ) 56 - 66 2009.03
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
イネ感光性遺伝子Hd6のイネ属間の変異を明らかにする目的で20種類のAゲノム野生種について塩基配列を比較し、74ヶ所に多型を見いだした。この変異を基に作成した系統樹はこれまでリボゾームRNAの変異により作成された系統樹と一致した。
DOI： 10.1007/s12284-008-9019-2
Other Link： http://www.springerlink.com/content/1939-8425/
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The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network Reviewed
Meier,S., Gehring,C., MacPherson,C.R., Kaur,M., Maqungo,M., Reuben,S.,Muyanga,S., Shin,M.-D., Wei,F.-J., Wanchana,S., Mauleon,R., Radovanovic,A.,Bruskiewich,R., Tanaka,T., Mohanty,R., Itoh,T., Wing,R., Gojobori,T., Sasaki,T.,Swarup,S., Hsing,Y.-I. & Bajic,V.B.
Rice 1 ( 2 ) 177 - 187 2008.12
Authorship：Lead author Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1007/s12284-008-9017-4
Other Link： http://www.springerlink.com/content/1939-8425/
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The Genome of a Lepidopteran Model Insect, the Silkworm Bombyx mori. Reviewed
The International Silkworm Genome Consortium
Insect Biochemistry and Molecular Biology 38 ( 12 ) 1036 - 1043 2008.12
Authorship：Lead author Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1016/j.ibmb.2008.11.004
Other Link： http://www.sciencedirect.com/science/journal/09651748
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Characterization of Internal Structure of the Nuclear Organizing Region in Rice (Oryza sativa L.) Reviewed
Mizuno,H., Sasaki,T. & Matsumpto,T.
Cytogenetic and Genome Research 121 ( 3-4 ) 282 - 285 2008.08
Authorship：Corresponding author Language：English Publishing type：Research paper (scientific journal)
DOI： 10.1159/000138898
Other Link： http://content.karger.com/ProdukteDB/produkte.asp?Aktion=JournalHome&ProduktNr=224037